species:   Rhsol
pid:       PID1797
parent:    novel-milR-87
paralog:   
locus:     KB317697.1:1081169-1081279
matures:   ['UCAAGGAAGCAGGGAUUGAGACC', 'CUCCUCCUUGGCCUCCUUGGCC']
srr:       SRR10747102
genome:    /Users/jax/+Genomes/Fungal_genomes/Rhsol.GCA_000334115.1_Rhisol_AG1IA_1.0_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Meng2021-lx.SRR10747102.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Meng2021-lx.SRR10747102.cram KB317697.1:1081169-1081279

0 out of bounds
1 alignments
1 proper strand
1 stranded perfect matches

                *************************                             **************************               
CUUGAGCACGUCACACGGCUCCUCCUUGGCCUCCUUGGCCAGGUUAAACACCUCAAGCAAGAAAUUGCCAAAAUCAAGGAAGCAGGGAUUGAGACCCAGACAAACGUCAAG
(((((....(((....(((((.((((((.(.(((((((..((((.....))))...((((....)))).....))))))).)))))))..))).))..))).....)))))
-------------------------------------------------------------------------UCAAGGAAGCAGGGAUUGAGACC--------------- l=23 a=0 c
------------------CUCCUCCUUGGCCUCCUUGGCC----------------------------------------------------------------------- l=22 a=0 c*
------------------------------------------------------------------------AUCAAGGAAGCAGGGAUUGAGACC--------------- l=24 a=1 ma
------------------CUCCUCCUUGGCCUCCUUGGCCA---------------------------------------------------------------------- l=23 a=0 ma*

------------------------------------------------------------------------AUCAAGGAAGCAGGGAUUGAGACC--------------- l=24 a=1 (ma)

mb-01011
ax-1001111
ku-01
ss-110111101110
fn-111
